Pairwise fitting emdb-1618 on emdb-2281 by gmfit



Pairwise fitting of target emdb-1618 on reference emdb-2281 by gmfit(PID:1194781).

RANK[1] Corr.Coeff:0.587 [JSmol] [Molmil]
TARGET(emdb-1618)
display:
color:
3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1618)]
REFERENCE(emdb-2281)
display:
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Three-dimensional reconstruction of intact human integrin alphaIIbbeta3 in a phospholipid bilayer nanodisc [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.587 0.496 0.476 0.469 0.413 0.340 0.321 0.314 0.300 0.292

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2281.map.gz", and read it.
  2. Download the Target map "emd_1618.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.502066,0.749133,0.432122 119.123846 center 0,0,0 model #1
    move 59.876789,61.679082,165.478220 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!