Pairwise fitting emdb-1618 on emdb-2259 by gmfit










Pairwise fitting of target emdb-1618 on reference emdb-2259 by gmfit(PID:561555).





RANK[1] Corr.Coeff:0.574

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

display:



color:



3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(emdb-2259)

display:



color:


negative stain single-particle reconstruction of conformation XII of the Ltn1 E3 ubiquitin Ligase [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.574
0.498
0.468
0.466
0.439
0.372
0.370
0.337
0.332
0.258







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2259.map.gz", and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.613318,0.513304,0.600300 128.671656 center 0,0,0 model #1
move 49.017057,74.419886,40.718901 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!