Pairwise fitting emdb-1565 on pdb-4v73 by gmfit



Pairwise fitting of target emdb-1565 on reference pdb-4v73 by gmfit(PID:1296607).

RANK[1] Corr.Coeff:0.924 [JSmol] [Molmil]
TARGET(emdb-1565)
display:
color:
Recognition of Phe-tRNAPhe, Trp-tRNATrp and : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1565)]
REFERENCE(pdb-4v73)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.924 0.786 0.772 0.771 0.753 0.748 0.745 0.738 0.737 0.733

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v73"(PDB-format) or "4v73"(mmCIF-format), and read it.
  2. Download the Target map "emd_1565.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.798791,-0.182161,0.573367 136.272793 center 0,0,0 model #1
    move 179.151978,173.217068,190.180386 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!