Pairwise fitting emdb-1559 on pdb-5njg by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-5njg by gmfit(PID:3843669).





RANK[1] Corr.Coeff:0.567

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-5njg)

display:



color:


b'STRUCTURE OF AN ABC TRANSPORTER: PART OF THE STRUCTURE THAT COULD BE  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.567
0.564
0.561
0.560
0.560
0.559
0.553
0.528
0.504
0.503







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5njg"(PDB-format) or 
 "5njg"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.657466,-0.258676,0.707690 178.690917 center 0,0,0 model #1
move 522.442009,572.880788,788.460373 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!