Pairwise fitting emdb-1559 on pdb-5a9k by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-5a9k by gmfit(PID:555460).





RANK[1] Corr.Coeff:0.753

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-5a9k)

display:



color:


b'STRUCTURAL BASIS FOR DNA STRAND SEPARATION BY A HEXAMERIC REPLICATIVE ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.753
0.731
0.731
0.731
0.688
0.684
0.683
0.680
0.677
0.667







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5a9k"(PDB-format) or 
 "5a9k"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.076581,-0.315289,0.945901 119.777490 center 0,0,0 model #1
move 784.370618,36.389559,-465.442017 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!