Pairwise fitting emdb-1559 on pdb-5a22 by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-5a22 by gmfit(PID:3966110).





RANK[1] Corr.Coeff:0.765

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-5a22)

display:



color:


b'STRUCTURE OF THE L PROTEIN OF VESICULAR STOMATITIS VIRUS FROM ELECTRON' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.765
0.750
0.728
0.724
0.712
0.704
0.698
0.694
0.640
0.636







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5a22"(PDB-format) or 
 "5a22"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.713686,-0.677140,0.179258 94.900723 center 0,0,0 model #1
move 72.665119,-806.314831,262.642668 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!