Pairwise fitting emdb-1559 on pdb-5a22 by gmfit



Pairwise fitting of target emdb-1559 on reference pdb-5a22 by gmfit(PID:19322).

RANK[1] Corr.Coeff:0.771 [JSmol] [Jmol_S] [Molmil]
TARGET(emdb-1559)
3D structure of human endoglin [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1559)]
REFERENCE(pdb-5a22)
STRUCTURE OF THE L PROTEIN OF VESICULAR STOMATITIS VIRUS FROM ELECTRON [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.771 0.769 0.764 0.761 0.735 0.721 0.716 0.711 0.657 0.655

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5a22"(PDB-format) or "5a22"(mmCIF-format), and read it.
  2. Download the Target map "emd_1559.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.757568,-0.131380,0.639398 49.682965 center 0,0,0 model #1
    move 9.444272,-816.108088,15.973988 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!