Pairwise fitting emdb-1559 on pdb-2y7h by gmfit



Pairwise fitting of target emdb-1559 on reference pdb-2y7h by gmfit(PID:19485).

RANK[1] Corr.Coeff:0.722 [JSmol] [Jmol_S] [Molmil]
TARGET(emdb-1559)
3D structure of human endoglin [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1559)]
REFERENCE(pdb-2y7h)
ATOMIC MODEL OF THE DNA-BOUND METHYLASE COMPLEX FROM THE TYPE I [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.722 0.721 0.721 0.721 0.718 0.717 0.717 0.714 0.711 0.703

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "2y7h"(PDB-format) or "2y7h"(mmCIF-format), and read it.
  2. Download the Target map "emd_1559.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.537000,-0.557546,0.633067 118.356550 center 0,0,0 model #1
    move 538.729720,468.498712,-548.608216 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!