Pairwise fitting emdb-1559 on emdb-5288 by gmfit



Pairwise fitting of target emdb-1559 on reference emdb-5288 by gmfit(PID:30726).

RANK[1] Corr.Coeff:0.727 [JSmol] [Jmol_S] [Molmil]
TARGET(emdb-1559)
3D structure of human endoglin [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1559)]
REFERENCE(emdb-5288)
The single particle reconstruction of the human Toll-like receptor 5 ectodomain in detergent [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.727 0.715 0.712 0.710 0.646 0.643 0.622 0.620 0.603 0.597

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5288.map.gz", and read it.
  2. Download the Target map "emd_1559.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.699578,-0.604710,0.380679 99.863500 center 0,0,0 model #1
    move 312.218054,-705.016040,459.149330 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!