Pairwise fitting emdb-1559 on emdb-3841 by gmfit



Pairwise fitting of target emdb-1559 on reference emdb-3841 by gmfit(PID:1359446).

RANK[1] Corr.Coeff:0.635 [JSmol] [Molmil]
TARGET(emdb-1559)
display:
color:
3D structure of human endoglin [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1559)]
REFERENCE(emdb-3841)
display:
color:
Negative-stain surface of low-pH sortilin dimer [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.635 0.610 0.590 0.589 0.567 0.566 0.561 0.561 0.560 0.560

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3841.map.gz", and read it.
  2. Download the Target map "emd_1559.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.246775,-0.850902,-0.463755 52.255527 center 0,0,0 model #1
    move -159.419424,-421.532606,-637.945861 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!