Pairwise fitting emdb-1446 on emdb-8487 by gmfit



Pairwise fitting of target emdb-1446 on reference emdb-8487 by gmfit(PID:4108550).

RANK[1] Corr.Coeff:0.521 [JSmol] [Molmil]
TARGET(emdb-1446)
display:
color:
Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1446)]
REFERENCE(emdb-8487)
display:
color:
Bacteriophage N3 [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.521 0.516 0.515 0.514 0.512 0.511 0.510 0.509 0.505 0.504

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8487.map.gz", and read it.
  2. Download the Target map "emd_1446.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.767783,-0.382765,-0.513810 168.347900 center 0,0,0 model #1
    move 683.238460,696.638519,677.501080 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 8487)] [Download the target GMM(emdb 1446)] [Download gmfit result file(4108550)]