Pairwise fitting emdb-1446 on emdb-8486 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-8486 by gmfit(PID:4094004).





RANK[1] Corr.Coeff:0.725

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-8486)

display:



color:


Bacillus phage PBS1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.725
0.715
0.713
0.711
0.709
0.708
0.705
0.704
0.704
0.704







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8486.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.232813,0.131878,-0.963539 131.668134 center 0,0,0 model #1
move 824.530675,829.667701,832.499133 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!