Pairwise fitting emdb-1446 on emdb-5696 by gmfit



Pairwise fitting of target emdb-1446 on reference emdb-5696 by gmfit(PID:1149312).

RANK[1] Corr.Coeff:0.630 [JSmol] [Molmil]
TARGET(emdb-1446)
display:
color:
Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1446)]
REFERENCE(emdb-5696)
display:
color:
Electron cryo-microscopy of human cytomegalovirus virion [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.630 0.619 0.612 0.604 0.604 0.604 0.601 0.600 0.597 0.596

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5696.map.gz", and read it.
  2. Download the Target map "emd_1446.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.097024,0.023340,-0.995008 156.773494 center 0,0,0 model #1
    move -0.079269,7.528478,9.465183 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!