Pairwise fitting emdb-1446 on emdb-5259 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-5259 by gmfit(PID:307580).





RANK[1] Corr.Coeff:0.615

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-5259)

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Seeing the Portal in Herpes Simplex Virus type I B-capsids. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.615
0.614
0.610
0.603
0.602
0.601
0.598
0.594
0.585
0.582







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5259.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.001869,0.994705,0.102751 73.978354 center 0,0,0 model #1
move 9.172216,-8.453052,0.404518 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!