Pairwise fitting emdb-1446 on emdb-3361 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-3361 by gmfit(PID:3953672).





RANK[1] Corr.Coeff:0.638

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-3361)

display:



color:


HSV bubblegram imaging [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.638
0.626
0.618
0.615
0.609
0.603
0.601
0.600
0.597
0.587







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3361.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.225155,-0.811521,-0.539202 25.156439 center 0,0,0 model #1
move -11.186188,-6.215051,8.778992 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!