Pairwise fitting emdb-1446 on emdb-2545 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-2545 by gmfit(PID:3949931).





RANK[1] Corr.Coeff:0.360

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-2545)

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Electron cryo-microscopy subtomogram average of a hexagon vertex in a MAC array [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.360
0.312
0.305
0.303
0.302
0.294
0.291
0.280
0.277
0.275







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2545.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.741949,0.568056,-0.356123 107.312190 center 0,0,0 model #1
move 369.614851,506.731833,361.656979 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!