Pairwise fitting emdb-1446 on emdb-1307 by gmfit



Pairwise fitting of target emdb-1446 on reference emdb-1307 by gmfit(PID:1664137).

RANK[1] Corr.Coeff:0.619 [JSmol] [Molmil]
TARGET(emdb-1446)
display:
color:
Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1446)]
REFERENCE(emdb-1307)
display:
color:
Electron cryotomography reveals the portal in the herpesvirus capsid. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.619 0.616 0.612 0.602 0.599 0.594 0.593 0.592 0.592 0.591

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1307.map.gz", and read it.
  2. Download the Target map "emd_1446.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.941179,-0.100934,-0.322482 154.847335 center 0,0,0 model #1
    move 3.123793,13.264270,-13.521302 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!