Pairwise fitting emdb-1430 on pdb-5ool by gmfit










Pairwise fitting of target emdb-1430 on reference pdb-5ool by gmfit(PID:4186049).





RANK[1] Corr.Coeff:0.760

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(pdb-5ool)

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b'STRUCTURE OF A NATIVE ASSEMBLY INTERMEDIATE OF THE HUMAN MITOCHONDRIAL' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.760
0.717
0.687
0.672
0.667
0.656
0.642
0.641
0.637
0.631







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5ool"(PDB-format) or 
 "5ool"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.373436,0.406574,0.833812 172.580158 center 0,0,0 model #1
move 208.611004,168.458129,193.807578 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5ool)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(4186049)]