Pairwise fitting emdb-1430 on emdb-8415 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-8415 by gmfit(PID:1482121).





RANK[1] Corr.Coeff:0.918

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-8415)

display:



color:


Time-resolved cryo electron microscopy map of the EF-G and RRF-bound 50S subunit [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.918
0.791
0.739
0.736
0.734
0.728
0.720
0.704
0.701
0.700







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8415.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.894764,0.435757,-0.097537 4.462479 center 0,0,0 model #1
move 212.948875,257.999578,249.619730 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!