Pairwise fitting emdb-1430 on emdb-8362 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-8362 by gmfit(PID:3716929).





RANK[1] Corr.Coeff:0.853

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-8362)

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Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.853
0.798
0.790
0.774
0.762
0.757
0.756
0.755
0.748
0.745







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8362.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.116672,-0.094839,-0.988632 89.306675 center 0,0,0 model #1
move 207.379605,212.227616,209.652412 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!