Pairwise fitting emdb-1430 on emdb-3640 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-3640 by gmfit(PID:3926906).





RANK[1] Corr.Coeff:0.768

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-3640)

display:



color:


2.9S structure of the 70S ribosome composing the S. aureus 100S complex [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.768
0.744
0.735
0.718
0.707
0.706
0.696
0.695
0.695
0.693







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3640.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.900442,0.326877,-0.286976 89.088701 center 0,0,0 model #1
move 223.574088,193.545310,227.018780 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!