Pairwise fitting emdb-1430 on emdb-3556 by gmfit



Pairwise fitting of target emdb-1430 on reference emdb-3556 by gmfit(PID:4105649).

RANK[1] Corr.Coeff:0.779 [JSmol] [Molmil]
TARGET(emdb-1430)
display:
color:
Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1430)]
REFERENCE(emdb-3556)
display:
color:
Yeast mitochondrial ribosome - large subunit (fitted to EMD 3551) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.779 0.755 0.753 0.745 0.740 0.738 0.726 0.718 0.717 0.716

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3556.map.gz", and read it.
  2. Download the Target map "emd_1430.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.918859,0.379227,-0.109019 45.556306 center 0,0,0 model #1
    move 238.511579,216.023954,227.758015 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3556)] [Download the target GMM(emdb 1430)] [Download gmfit result file(4105649)]