Pairwise fitting emdb-1430 on emdb-3556 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-3556 by gmfit(PID:4756).





RANK[1] Corr.Coeff:0.779

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-3556)

display:



color:


Yeast mitochondrial ribosome - large subunit (fitted to EMD 3551) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.779
0.755
0.753
0.745
0.740
0.738
0.726
0.718
0.717
0.716







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3556.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.918859,0.379227,-0.109019 45.556306 center 0,0,0 model #1
move 238.511579,216.023954,227.758015 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3556)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(4756)]