Pairwise fitting emdb-1402 on pdb-3j3i by gmfit










Pairwise fitting of target emdb-1402 on reference pdb-3j3i by gmfit(PID:3535022).





RANK[1] Corr.Coeff:0.056

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1402)

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Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1402)]







REFERENCE(pdb-3j3i)

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b'PENICILLIUM CHRYSOGENUM VIRUS (PCV) CAPSID STRUCTURE                  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.056
0.056
0.056
0.056
0.056
0.056
0.056
0.056
0.056
0.056







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j3i"(PDB-format) or 
 "3j3i"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1402.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.230358,0.970943,-0.064843 22.237287 center 0,0,0 model #1
move 87.002253,61.910607,140.845821 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!