Pairwise fitting emdb-1402 on emdb-5425 by gmfit










Pairwise fitting of target emdb-1402 on reference emdb-5425 by gmfit(PID:4167890).





RANK[1] Corr.Coeff:0.513

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1402)

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color:



Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1402)]







REFERENCE(emdb-5425)

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Cryo-EM reconstruction of fully-mature capsid of Nudaurelia capensis omega virus (NwV) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.513
0.505
0.485
0.484
0.484
0.483
0.483
0.483
0.483
0.482







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5425.map.gz", and read it.

  2.  Download the Target map "emd_1402.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.146032,0.513690,-0.845457 105.460620 center 0,0,0 model #1
move -12.788224,22.632634,-10.527121 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5425)]

[Download the target GMM(emdb 1402)]

[Download gmfit result file(4167890)]