Pairwise fitting emdb-1402 on emdb-5425 by gmfit



Pairwise fitting of target emdb-1402 on reference emdb-5425 by gmfit(PID:4098834).

RANK[1] Corr.Coeff:0.513 [JSmol] [Molmil]
TARGET(emdb-1402)
display:
color:
Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1402)]
REFERENCE(emdb-5425)
display:
color:
Cryo-EM reconstruction of fully-mature capsid of Nudaurelia capensis omega virus (NwV) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.513 0.505 0.485 0.484 0.484 0.483 0.483 0.483 0.483 0.482

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5425.map.gz", and read it.
  2. Download the Target map "emd_1402.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.146032,0.513690,-0.845457 105.460620 center 0,0,0 model #1
    move -12.788224,22.632634,-10.527121 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5425)] [Download the target GMM(emdb 1402)] [Download gmfit result file(4098834)]