Pairwise fitting emdb-1402 on emdb-1933 by gmfit










Pairwise fitting of target emdb-1402 on reference emdb-1933 by gmfit(PID:3506300).





RANK[1] Corr.Coeff:0.656

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1402)

display:



color:



Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1402)]







REFERENCE(emdb-1933)

display:



color:


wt Rabbit Hemorrhagic Disease Virus (RHDV)capsid [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.656
0.655
0.655
0.654
0.653
0.652
0.651
0.650
0.649
0.648







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1933.map.gz", and read it.

  2.  Download the Target map "emd_1402.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.235123,-0.905934,-0.352137 131.520846 center 0,0,0 model #1
move 1.292288,0.614959,0.248210 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!