Pairwise fitting emdb-1390 on emdb-1843 by gmfit










Pairwise fitting of target emdb-1390 on reference emdb-1843 by gmfit(PID:3787118).





RANK[1] Corr.Coeff:0.455

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1390)

display:



color:



Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1390)]







REFERENCE(emdb-1843)

display:



color:


Structural basis for the subunit assembly of the anaphase promoting complex [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.455
0.404
0.359
0.341
0.277
0.265
0.261
0.248
0.234
0.233







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1843.map.gz", and read it.

  2.  Download the Target map "emd_1390.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.487058,-0.203393,0.849356 108.523676 center 0,0,0 model #1
move 62.459822,-17.497795,17.195882 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!