Pairwise fitting emdb-1386 on emdb-5873 by gmfit



Pairwise fitting of target emdb-1386 on reference emdb-5873 by gmfit(PID:1299852).

RANK[1] Corr.Coeff:0.595 [JSmol] [Molmil]
TARGET(emdb-1386)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1386)]
REFERENCE(emdb-5873)
display:
color:
Single-particle reconstruction of conformation XIII of ligand-free sGC [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.595 0.583 0.496 0.481 0.463 0.430 0.326 0.234 0.159 0.145

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5873.map.gz", and read it.
  2. Download the Target map "emd_1386.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.971522,0.215941,0.097540 70.860880 center 0,0,0 model #1
    move 15.086108,-16.453239,22.283874 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!