Pairwise fitting emdb-1386 on emdb-1380 by gmfit










Pairwise fitting of target emdb-1386 on reference emdb-1380 by gmfit(PID:3570278).





RANK[1] Corr.Coeff:0.881

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1386)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1386)]







REFERENCE(emdb-1380)

display:



color:


Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.881
0.603
0.587
0.481
0.430
0.413
0.237
0.225
0.225
0.214







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1380.map.gz", and read it.

  2.  Download the Target map "emd_1386.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.264131,0.424249,-0.866168 0.162057 center 0,0,0 model #1
move 0.016421,-0.410246,0.054904 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!