Pairwise fitting emdb-1369 on pdb-5v7q by gmfit










Pairwise fitting of target emdb-1369 on reference pdb-5v7q by gmfit(PID:4170087).





RANK[1] Corr.Coeff:0.922

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1369)

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Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1369)]







REFERENCE(pdb-5v7q)

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b'CRYO-EM STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM MYCOBACTERIUM   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.922
0.796
0.781
0.755
0.746
0.743
0.739
0.730
0.730
0.726







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5v7q"(PDB-format) or 
 "5v7q"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1369.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.577635,-0.815687,0.031494 172.750704 center 0,0,0 model #1
move 125.849946,159.595474,157.668947 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5v7q)]

[Download the target GMM(emdb 1369)]

[Download gmfit result file(4170087)]