Pairwise fitting emdb-1369 on pdb-5t5h by gmfit










Pairwise fitting of target emdb-1369 on reference pdb-5t5h by gmfit(PID:1310857).





RANK[1] Corr.Coeff:0.804

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1369)

display:



color:



Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1369)]







REFERENCE(pdb-5t5h)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.804
0.803
0.789
0.785
0.776
0.774
0.741
0.731
0.722
0.715







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5t5h"(PDB-format) or 
 "5t5h"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1369.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.067284,0.181940,-0.981005 127.867753 center 0,0,0 model #1
move 120.942715,105.349208,113.613163 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!