Pairwise fitting emdb-1369 on pdb-4csu by gmfit



Pairwise fitting of target emdb-1369 on reference pdb-4csu by gmfit(PID:4060050).

RANK[1] Corr.Coeff:0.915 [JSmol] [Molmil]
TARGET(emdb-1369)
display:
color:
Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1369)]
REFERENCE(pdb-4csu)
display:
color:
b'CRYO-EM STRUCTURES OF THE 50S RIBOSOME SUBUNIT BOUND WITH OBGE ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.915 0.768 0.758 0.731 0.729 0.727 0.699 0.698 0.696 0.693

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4csu"(PDB-format) or "4csu"(mmCIF-format), and read it.
  2. Download the Target map "emd_1369.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.399037,0.908419,-0.124679 132.100802 center 0,0,0 model #1
    move 163.756842,190.195939,184.394950 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4csu)] [Download the target GMM(emdb 1369)] [Download gmfit result file(4060050)]