Pairwise fitting emdb-1369 on pdb-3j5l by gmfit










Pairwise fitting of target emdb-1369 on reference pdb-3j5l by gmfit(PID:1286711).





RANK[1] Corr.Coeff:0.935

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1369)

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Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1369)]







REFERENCE(pdb-3j5l)

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b'STRUCTURE OF THE E. COLI 50S SUBUNIT WITH ERMBL NASCENT CHAIN         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.935
0.810
0.776
0.775
0.771
0.753
0.742
0.740
0.731
0.729







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j5l"(PDB-format) or 
 "3j5l"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1369.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.708712,-0.570105,0.415580 5.114524 center 0,0,0 model #1
move 191.445664,189.639589,186.523961 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!