Pairwise fitting emdb-1315 on pdb-5njt by gmfit










Pairwise fitting of target emdb-1315 on reference pdb-5njt by gmfit(PID:3836945).





RANK[1] Corr.Coeff:0.799

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(pdb-5njt)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.799
0.757
0.741
0.738
0.712
0.696
0.691
0.689
0.682
0.676







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5njt"(PDB-format) or 
 "5njt"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.447146,-0.893328,0.045010 175.682358 center 0,0,0 model #1
move 238.667062,243.572955,245.832246 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!