Pairwise fitting emdb-1315 on pdb-4v6z by gmfit










Pairwise fitting of target emdb-1315 on reference pdb-4v6z by gmfit(PID:543334).





RANK[1] Corr.Coeff:0.807

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(pdb-4v6z)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.807
0.778
0.742
0.714
0.711
0.705
0.703
0.693
0.689
0.688







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6z"(PDB-format) or 
 "4v6z"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.183934,-0.957266,-0.223181 127.765742 center 0,0,0 model #1
move 181.396294,166.604960,189.084023 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!