Pairwise fitting emdb-1315 on pdb-4v6v by gmfit










Pairwise fitting of target emdb-1315 on reference pdb-4v6v by gmfit(PID:2408095).





RANK[1] Corr.Coeff:0.801

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(pdb-4v6v)

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color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.801
0.786
0.753
0.741
0.738
0.725
0.722
0.712
0.701
0.694







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6v"(PDB-format) or 
 "4v6v"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.659875,0.751366,-0.003612 156.791589 center 0,0,0 model #1
move 184.089829,180.660271,185.639604 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!