Pairwise fitting emdb-1315 on emdb-8004 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-8004 by gmfit(PID:1425947).

RANK[1] Corr.Coeff:0.797 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-8004)
display:
color:
RNC in complex with SRP with detached NG domain [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.797 0.772 0.756 0.747 0.725 0.705 0.680 0.677 0.674 0.670

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8004.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.395132,-0.917761,-0.039831 179.252949 center 0,0,0 model #1
    move 206.793813,214.034551,214.413170 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!