Pairwise fitting emdb-1315 on emdb-6474 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-6474 by gmfit(PID:4110760).





RANK[1] Corr.Coeff:0.790

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-6474)

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Cryo-EM structure of PoTC-EF-G(S588P)-GDPNP [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.790
0.757
0.757
0.726
0.717
0.705
0.704
0.704
0.678
0.670







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6474.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.095203,-0.614521,-0.783135 154.301252 center 0,0,0 model #1
move 209.102475,209.548800,210.253561 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6474)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4110760)]