Pairwise fitting emdb-1315 on emdb-5562 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-5562 by gmfit(PID:3906861).





RANK[1] Corr.Coeff:0.801

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

display:



color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-5562)

display:



color:


tetracycline resistance protein Tet(O) bound to the ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.801
0.784
0.767
0.757
0.723
0.716
0.715
0.706
0.702
0.682







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5562.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.649980,0.759916,-0.007319 153.630007 center 0,0,0 model #1
move 183.287578,180.398275,186.179991 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!