Pairwise fitting emdb-1315 on emdb-1798 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-1798 by gmfit(PID:4097735).





RANK[1] Corr.Coeff:0.946

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-1798)

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color:


tRNA translocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.946
0.736
0.722
0.693
0.687
0.680
0.667
0.665
0.660
0.658







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1798.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.429569,0.522970,0.736188 8.097827 center 0,0,0 model #1
move 2.499106,3.816977,-0.750065 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1798)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4097735)]