Pairwise fitting emdb-1315 on emdb-1798 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-1798 by gmfit(PID:4097735).

RANK[1] Corr.Coeff:0.946 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-1798)
display:
color:
tRNA translocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.946 0.736 0.722 0.693 0.687 0.680 0.667 0.665 0.660 0.658

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1798.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.429569,0.522970,0.736188 8.097827 center 0,0,0 model #1
    move 2.499106,3.816977,-0.750065 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1798)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4097735)]