Pairwise fitting emdb-1315 on emdb-1524 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-1524 by gmfit(PID:4014988).





RANK[1] Corr.Coeff:0.919

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

display:



color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-1524)

display:



color:


Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.919
0.724
0.702
0.700
0.670
0.667
0.665
0.660
0.658
0.656







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1524.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.480926,-0.665749,0.570516 2.239081 center 0,0,0 model #1
move 2.975662,0.489998,0.013849 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!