Pairwise fitting emdb-1311 on emdb-5943 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-5943 by gmfit(PID:2568964).





RANK[1] Corr.Coeff:0.876

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-5943)

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color:


Cryo-EM Map of a yeast ribosome bound to the TSV IRES (Class I) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.876
0.756
0.725
0.718
0.716
0.707
0.706
0.686
0.681
0.678







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5943.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.001852,-0.022553,0.999744 90.866087 center 0,0,0 model #1
move 222.937625,209.628796,213.163087 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!