Pairwise fitting emdb-1311 on emdb-5942 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-5942 by gmfit(PID:3089740).





RANK[1] Corr.Coeff:0.876

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-5942)

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Cryo-EM Map of a yeast ribosome bound to the TSV IRES (Class II) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.876
0.755
0.726
0.717
0.705
0.703
0.698
0.668
0.667
0.666







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5942.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.010898,-0.043307,0.999002 91.460226 center 0,0,0 model #1
move 222.777848,209.626317,212.921134 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!