Pairwise fitting emdb-1311 on emdb-4140 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-4140 by gmfit(PID:905194).





RANK[1] Corr.Coeff:0.873

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-4140)

display:



color:


Nonstop ribosomal complex bound with Dom34 and Hbs1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.873
0.747
0.713
0.712
0.709
0.697
0.689
0.663
0.661
0.656







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4140.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.693996,-0.710948,0.113681 164.644313 center 0,0,0 model #1
move 203.761721,197.686470,210.375031 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!