Pairwise fitting emdb-1311 on emdb-4133 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-4133 by gmfit(PID:4034854).





RANK[1] Corr.Coeff:0.864

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-4133)

display:



color:


Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.864
0.765
0.761
0.741
0.725
0.722
0.719
0.713
0.684
0.679







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4133.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.033198,-0.964533,-0.261867 18.882633 center 0,0,0 model #1
move 273.707879,281.515074,271.670276 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!