Pairwise fitting emdb-1311 on emdb-4131 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-4131 by gmfit(PID:1377300).

RANK[1] Corr.Coeff:0.857 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-4131)
display:
color:
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.857 0.810 0.760 0.739 0.711 0.704 0.703 0.698 0.685 0.683

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_4131.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.003048,-0.951119,-0.308809 19.341726 center 0,0,0 model #1
    move 272.575389,280.175581,271.953305 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!