Pairwise fitting emdb-1311 on emdb-4130 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-4130 by gmfit(PID:3066078).





RANK[1] Corr.Coeff:0.862

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-4130)

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Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.862
0.749
0.740
0.706
0.704
0.701
0.680
0.677
0.671
0.670







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4130.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.088328,-0.963282,-0.253545 19.410547 center 0,0,0 model #1
move 272.867382,281.185671,272.291977 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!