Pairwise fitting emdb-1311 on emdb-3227 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-3227 by gmfit(PID:2124466).





RANK[1] Corr.Coeff:0.871

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-3227)

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Cryo-EM map of a native 80S-ribosome-eIF-5A complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.871
0.788
0.774
0.757
0.727
0.723
0.714
0.712
0.702
0.660







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3227.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.687247,-0.726062,0.022924 177.893921 center 0,0,0 model #1
move 195.558017,193.103662,207.224895 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!