Pairwise fitting emdb-1311 on emdb-2875 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2875 by gmfit(PID:4169106).





RANK[1] Corr.Coeff:0.861

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2875)

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color:


Cryo electron microscopy of actively translating human polysomes (POST state). [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.861
0.750
0.736
0.734
0.713
0.713
0.707
0.691
0.688
0.688







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2875.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.757602,-0.652716,-0.000933 170.628049 center 0,0,0 model #1
move 185.852982,183.235870,195.409528 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2875)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4169106)]