Pairwise fitting emdb-1311 on emdb-2650 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2650 by gmfit(PID:4170774).





RANK[1] Corr.Coeff:0.791

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2650)

display:



color:


Structure of the mammalian ribosome-Sec61 complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.791
0.744
0.731
0.730
0.722
0.706
0.699
0.688
0.685
0.675







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2650.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.689533,-0.534550,-0.488672 85.879059 center 0,0,0 model #1
move 300.030468,281.279803,280.619265 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!