Pairwise fitting emdb-1311 on emdb-2421 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2421 by gmfit(PID:4134053).





RANK[1] Corr.Coeff:0.880

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2421)

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Molecular architecture of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.880
0.746
0.744
0.727
0.726
0.725
0.713
0.697
0.689
0.665







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2421.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.635660,-0.275545,-0.721119 7.823329 center 0,0,0 model #1
move 3.434563,-5.884665,-8.475316 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!