Pairwise fitting emdb-1311 on emdb-1553 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-1553 by gmfit(PID:3421978).

RANK[1] Corr.Coeff:0.876 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-1553)
display:
color:
Pretranslocation ribosome. Group after ML3D classification. Racheted ribosome with tRNAs in hybrid positions. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.876 0.706 0.693 0.674 0.666 0.665 0.659 0.657 0.650 0.647

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1553.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.696074,0.717890,-0.010714 178.593006 center 0,0,0 model #1
    move 0.302142,-6.114400,5.711394 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!